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You're seeing this because you're logged in: Blue datasets are the hidden datasets, only visible to lab members who are logged in. For real, if you don't believe me, open the page in incognito.{%endif%}

Filter by any element on the table (e.g. specimen age or anatomical position)

Dataset

Description

Manuscript

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Species

Anatomical Position

Selected Cells

Data Type

Age

Sex

Analysis By

Principal Investigator

Thompson et al. 2026

Rete ridges form via evolutionarily distinct mechanisms in mammalian skin

Pig

Back Skin

Unsorted Skin, Epidermal Subset

scRNA-seq, Stereo-seq

E90, P3, P10, 6mo

Male

Sean Thompson

Ryan Driskell

Glover et al. 2023

The developmental basis of fingerprint pattern formation and variation

Human

Volar digital skin

Unsorted Skin, Epidermal Subset

snRNA-seq

GW14

Unknown

Sean Thompson

Denis Headon

Solé-Boldo et al. 2020

Single-cell transcriptomes of the human skin reveal age-related loss of fibroblast priming

Human

Trunk

Unsorted Skin, Epidermal Subset

snRNA-seq

Adult

Male, Female

Sean Thompson

Manuel Rodríguez-Paredes & Frank Lyko

Cheng et al. 2018

Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution

Human

Foreskin

Enriched Epidermis, Epidermal Subset

snRNA-seq

Neonate

Male

Sean Thompson

Raymond Cho

Liu et al. 2022

Hedgehog signaling reprograms hair follicle niche fibroblasts to a hyper-activated state

Mouse

Back

Unsorted Skin, Epidermal Subset

snRNA-seq

P46

Female

Sean Thompson

Maksim Plikus

Phan et al., 2023

Lineage commitment of dermal fibroblast progenitors is controlled by Kdm6b-mediated chromatin demethylation

Mouse

Back Skin

Wounded Whole Cells

scRNA-seq, scATAC-seq

E14.5, E16.5, P5

Male

Quan Phan

Ryan Driskell

Thompson et al., 2021

Parallel Single-Cell Multiomics Analysis of Neonatal Skin Reveals the Transitional Fibroblast States that Restrict Differentiation into Distinct Fates

Mouse

Back Skin

Wounded Whole Cells

scRNA-seq, scATAC-seq

P0

Male

Sean Thompson

Ryan Driskell

Thompson et al., 2021 Fibroblast Subset

Parallel Single-Cell Multiomics Analysis of Neonatal Skin Reveals the Transitional Fibroblast States that Restrict Differentiation into Distinct Fates

Mouse

Back Skin

Unsorted Whole Dermis, Fibroblast Subset

scRNA-seq, scATAC-seq

P0

Male

Sean Thompson

Ryan Driskell

Phan et al., 2020

Lef1 expression in fibroblasts maintains developmental potential in adult skin to regenerate wounds

Mouse

Back Skin

Whole Cells

scRNAseq

P2-P21

Male

Quan Phan

Ryan Driskell

Phan et al., 2020 Fibroblast Subset

Lef1 expression in fibroblasts maintains developmental potential in adult skin to regenerate wounds

Mouse

Back Skin

Fibroblast Subset

scRNA-seq

P2-P21

Male

Quan Phan

Ryan Driskell

Phan et al., 2020

Single-cell transcriptomic analysis of small and large wounds reveals the distinct spatial organization of regenerative fibroblasts

Mouse

Back Skin

Wounded Whole Cells

scRNA-seq

P2-P21

Male

Quan Phan

Ryan Driskell

Phan et al., 2020 Fibroblast Subset

Single-cell transcriptomic analysis of small and large wounds reveals the distinct spatial organization of regenerative fibroblasts

Mouse

Back Skin

Wounded Fibroblast Subset

scRNA-seq

P2-P21

Male

Quan Phan

Ryan Driskell

{% for dataset in datasets %} {% if not dataset.hidden %}

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{% endif %} {% endfor %} {% comment %} This portion verifies if the user is logged in or not, and it displays hidden datasets in BLUE This is for the purpose of members of the lab being able to see our hidden data, whether for testing purposes, or data we don't yet want to publish for the public. {% endcomment %} {% if request.user.is_authenticated%} {% for dataset in datasets %} {% if dataset.hidden %}

{{ dataset.name }}

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{% endif %} {% endfor %} {%endif%}
{% endblock %}